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1

Ecotoxicology and spatial modeling in population dynamics: An illustration with brown trout

Arnaud Chaumot, Sandrine Charles, Patrick Flammarion, Pierre Auger

Journal:

Environmental Toxicology and Chemistry

Year:

2003

Language:

english

File:

PDF, 281 KB

english, 2003

2

Aquatic Ecotoxicology || Gammarids as Reference Species for Freshwater Monitoring

Chaumot, Arnaud

Year:

2015

Language:

english

File:

PDF, 1.01 MB

english, 2015

3

Ecological Modeling for the Extrapolation of Ecotoxicological Effects Measured during in Situ Assays in Gammarus

Coulaud, Romain, Geffard, Olivier, Coquillat, Amandine, Quéau, Hervé, Charles, Sandrine, Chaumot, Arnaud

Journal:

Environmental Science & Technology

Year:

2014

Language:

english

File:

PDF, 905 KB

english, 2014

4

Osmoregulatory responses to cadmium in reference and historically metal contaminated Gammarus fossarum (Crustacea, Amphipoda) populations

Dayras, Paul, Charmantier, Guy, Chaumot, Arnaud, Vigneron, Amandine, Coquery, Marina, Quéau, Hervé, Artells, Ester, Lignot, Jehan-Hervé, Geffard, Olivier, Issartel, Julien

Journal:

Year:

2017

Language:

english

File:

PDF, 25.58 MB

english, 2017

5

Use of sperm DNA integrity as a marker for exposure to contamination in Palaemon serratus (Pennant 1777): Intrinsic variability, baseline level and in situ deployment

Erraud, Alexandre, Bonnard, Marc, Chaumot, Arnaud, Geffard, Olivier, Duflot, Aurélie, Forget-Leray, Joëlle, Le Foll, Frank, Geffard, Alain, Xuereb, Benoit

Journal:

Year:

2018

Language:

english

File:

PDF, 2.12 MB

english, 2018

6

Assessment of sperm DNA integrity within the Palaemon longirostris (H. ) population of the Seine estuary

Erraud, Alexandre, Bonnard, Marc, Geffard, Olivier, Chaumot, Arnaud, Duflot, Aurélie, Geffard, Alain, Forget-Leray, Joëlle, Xuereb, Benoit

Journal:

Environmental Pollution

Year:

2019

Language:

english

File:

PDF, 1.04 MB

english, 2019

7

Biomarkers as tools for monitoring within the Water Framework Directive context: concept, opinions and advancement of expertise

Milinkovitch, Thomas, Geffard, Olivier, Geffard, Alain, Mouneyrac, Catherine, Chaumot, Arnaud, Xuereb, Benoit, Fisson, Cédric, Minier, Christophe, Auffret, Michel, Perceval, Olivier, Egea, Emilie, San

Journal:

Environmental Science and Pollution Research

Year:

2019

Language:

english

File:

PDF, 170 KB

english, 2019

8

Combining proteogenomics and metaproteomics for deep taxonomic and functional characterization of microbiomes from a non-sequenced host

Gouveia, Duarte, Pible, Olivier, Culotta, Karen, Jouffret, Virginie, Geffard, Olivier, Chaumot, Arnaud, Degli-Esposti, Davide, Armengaud, Jean

Journal:

npj Biofilms and Microbiomes

Year:

2020

File:

PDF, 1.10 MB

2020

9

Ovarian cycle and embryonic development in Gammarus fossarum: Application for reproductive toxicity assessment

Olivier Geffard, Benoit Xuereb, Arnaud Chaumot, Alain Geffard, Sylvie Biagianti, Claire Noël, Khedidja Abbaci, Jeanne Garric, Guy Charmantier, Mireille Charmantier-Daures

Journal:

Environmental Toxicology and Chemistry

Year:

2010

Language:

english

File:

PDF, 270 KB

english, 2010

10

Mass spectrometry assay as an alternative to the enzyme-linked immunosorbent assay test for biomarker quantitation in ecotoxicology: Application to vitellogenin in Crustacea (Gammarus fossarum)

Romain Simon, Guillaume Jubeaux, Arnaud Chaumot, Jérôme Lemoine, Olivier Geffard, Arnaud Salvador

Journal:

Journal of Chromatography A

Year:

2010

Language:

english

File:

PDF, 311 KB

english, 2010

11

Vitellogenin-like gene expression in freshwater amphipodGammarus fossarum(Koch, 1835): functional characterization in females and potential for use as an endocrine disruption biomarker in males

Benoît Xuereb, Laurent Bezin, Arnaud Chaumot, Hélène Budzinski, Sylvie Augagneur, Renaud Tutundjian, Jeanne Garric, Olivier Geffard

Journal:

Year:

2011

Language:

english

File:

PDF, 541 KB

english, 2011

12

Structural and functional characterization of a novel type of ligand-independent RXR-USP receptor

Iwema, Thomas, Billas, Isabelle ML, Beck, Yannick, Bonneton, François, Nierengarten, Hélène, Chaumot, Arnaud, Richards, Geoff, Laudet, Vincent, Moras, Dino

Journal:

The EMBO Journal

Year:

2007

Language:

english

File:

PDF, 698 KB

english, 2007

13

Effects of chronic dietary and waterborne cadmium exposures on the contamination level and reproduction of daphnia magna

Olivier Geffard, Alain Geffard, Arnaud Chaumot, Bernard Vollat, Cathy Alvarez, Marie-Hélène Tusseau-Vuillemin, Jeanne Garric

Journal:

Environmental Toxicology and Chemistry

Year:

2008

Language:

english

File:

PDF, 89 KB

english, 2008

14

Vitellogenin-like Proteins among Invertebrate Species Diversity: Potential of Proteomic Mass Spectrometry for Biomarker Development

Jubeaux, Guillaume, Audouard-Combe, Fabien, Simon, Romain, Tutundjian, Renaud, Salvador, Arnaud, Geffard, Olivier, Chaumot, Arnaud

Journal:

Environmental Science & Technology

Year:

2012

Language:

english

File:

PDF, 1.67 MB

english, 2012

15

Food availability effect on population dynamics of the midge Chironomus riparius: a Leslie modeling approach

S. Charles, M. Ferreol, A. Chaumot, A.R.R. Péry

Journal:

Ecological Modelling

Year:

2004

Language:

english

File:

PDF, 309 KB

english, 2004

16

Ecotoxicology and population dynamics: Using DEBtox models in a Leslie modeling approach

C. Lopes, A.R.R. Péry, A. Chaumot, S. Charles

Journal:

Ecological Modelling

Year:

2005

Language:

english

File:

PDF, 258 KB

english, 2005

17

First step of a modeling approach to evaluate spatial heterogeneity in a fish (Cottus gobio) population dynamics

A. Chaumot, N. Milioni, A. Abdoli, D. Pont, S. Charles

Journal:

Ecological Modelling

Year:

2006

Language:

english

File:

PDF, 512 KB

english, 2006

18

Towards a renewed research agenda in ecotoxicology

Joan Artigas, Gertie Arts, Marc Babut, Anna Barra Caracciolo, Sandrine Charles, Arnaud Chaumot, Bruno Combourieu, Ingela Dahllöf, Denis Despréaux, Benoit Ferrari, Nikolai Friberg, Jeanne Garric, Olivi

Journal:

Environmental Pollution

Year:

2012

Language:

english

File:

PDF, 169 KB

english, 2012

19

Acetylcholinesterase activity in Gammarus fossarum (Crustacea Amphipoda): Intrinsic variability, reference levels, and a reliable tool for field surveys

Benoît Xuereb, Arnaud Chaumot, Raphael Mons, Jeanne Garric, Olivier Geffard

Journal:

Aquatic Toxicology

Year:

2009

Language:

english

File:

PDF, 663 KB

english, 2009

20

Additive vs non-additive genetic components in lethal cadmium tolerance of Gammarus (Crustacea): Novel light on the assessment of the potential for adaptation to contamination

Arnaud Chaumot, Pierre Gos, Jeanne Garric, Olivier Geffard

Journal:

Aquatic Toxicology

Year:

2009

Language:

english

File:

PDF, 511 KB

english, 2009

21

Vitellogenin-like proteins in the freshwater amphipod Gammarus fossarum (Koch, 1835): Functional characterization throughout reproductive process, potential for use as an indicator of oocyte quality and endocrine disruption biomarker in males

Guillaume Jubeaux, Romain Simon, Arnaud Salvador, Hervé Quéau, Arnaud Chaumot, Olivier Geffard

Journal:

Aquatic Toxicology

Year:

2012

Language:

english

File:

PDF, 567 KB

english, 2012

22

Vitellogenin-like protein measurement in caged Gammarus fossarum males as a biomarker of endocrine disruptor exposure: Inconclusive experience

Guillaume Jubeaux, Romain Simon, Arnaud Salvador, Christelle Lopes, Emilie Lacaze, Hervé Quéau, Arnaud Chaumot, Olivier Geffard

Journal:

Aquatic Toxicology

Year:

2012

Language:

english

File:

PDF, 567 KB

english, 2012

23

Annotation of Tribolium nuclear receptors reveals an increase in evolutionary rate of a network controlling the ecdysone cascade

François Bonneton, Arnaud Chaumot, Vincent Laudet

Journal:

Insect Biochemistry and Molecular Biology

Year:

2008

Language:

english

File:

PDF, 468 KB

english, 2008

24

In situ feeding assay with Gammarus fossarum (Crustacea): Modelling the influence of confounding factors to improve water quality biomonitoring

Romain Coulaud, Olivier Geffard, Benoît Xuereb, Emilie Lacaze, Hervé Quéau, Jeanne Garric, Sandrine Charles, Arnaud Chaumot

Journal:

Year:

2011

Language:

english

File:

PDF, 529 KB

english, 2011

25

Caged Gammarus fossarum (Crustacea) as a robust tool for the characterization of bioavailable contamination levels in continental waters: Towards the determination of threshold values

Jean-Philippe Besse, Marina Coquery, Christelle Lopes, Arnaud Chaumot, Hélène Budzinski, Pierre Labadie, Olivier Geffard

Journal:

Year:

2013

Language:

english

File:

PDF, 533 KB

english, 2013

26

Do migratory or demographic disruptions rule the population impact of pollution in spatial networks?

A. Chaumot, S. Charles, P. Flammarion, P. Auger

Journal:

Theoretical Population Biology

Year:

2003

Language:

english

File:

PDF, 238 KB

english, 2003

27

Molecular adaptation and resilience of the insect’s nuclear receptor USP

Arnaud Chaumot, Jean-Luc Da Lage, Oscar Maestro, David Martin, Thomas Iwema, Frederic Brunet, Xavier Belles, Vincent Laudet, François Bonneton

Journal:

BMC Evolutionary Biology

Year:

2012

Language:

english

File:

PDF, 581 KB

english, 2012

28

Effect of water quality and confounding factors on digestive enzyme activities inGammarus fossarum

L. Charron, O. Geffard, A. Chaumot…

Journal:

Environmental Science and Pollution Research

Year:

2013

Language:

english

File:

PDF, 395 KB

english, 2013

29

Non-model organisms, a species endangered by proteogenomics

Armengaud, Jean, Trapp, Judith, Pible, Olivier, Geffard, Olivier, Chaumot, Arnaud, Hartmann, Erica M.

Journal:

Journal of Proteomics

Year:

2014

Language:

english

File:

PDF, 1.27 MB

english, 2014

30

Life-history phenology strongly influences population vulnerability to toxicants: A case study with the mudsnail Potamopyrgus antipodarum

Coulaud, Romain, Mouthon, Jacques, Quéau, Hervé, Charles, Sandrine, Chaumot, Arnaud

Journal:

Environmental Toxicology and Chemistry

Year:

2013

Language:

english

File:

PDF, 486 KB

english, 2013

31

Next-Generation Proteomics: Toward Customized Biomarkers for Environmental Biomonitoring

Trapp, Judith, Armengaud, Jean, Salvador, Arnaud, Chaumot, Arnaud, Geffard, Olivier

Journal:

Environmental Science & Technology

Year:

2014

Language:

english

File:

PDF, 1.08 MB

english, 2014

32

Proteomic Investigation of Male Gammarus fossarum , a Freshwater Crustacean, in Response to Endocrine Disruptors

Trapp, Judith, Armengaud, Jean, Pible, Olivier, Gaillard, Jean-Charles, Abbaci, Khedidja, Habtoul, Yassine, Chaumot, Arnaud, Geffard, Olivier

Journal:

Journal of Proteome Research

Year:

2015

Language:

english

File:

PDF, 2.50 MB

english, 2015

33

Proteogenomics of Gammarus fossarum to Document the Reproductive System of Amphipods

Trapp, Judith, Geffard, Olivier, Imbert, Gilles, Gaillard, Jean-Charles, Davin, Anne-Hélène, Chaumot, Arnaud, Armengaud, Jean

Journal:

Molecular & Cellular Proteomics

Year:

2014

Language:

english

File:

PDF, 1.45 MB

english, 2014

34

Linking feeding inhibition with reproductive impairment in Gammarus confirms the ecological relevance of feeding assays in environmental monitoring

Coulaud, Romain, Geffard, Olivier, Vigneron, Amandine, Quéau, Hervé, François, Adeline, Chaumot, Arnaud

Journal:

Environmental Toxicology and Chemistry

Year:

2015

Language:

english

File:

PDF, 464 KB

english, 2015

35

Structural and Evolutionary Innovation of the Heterodimerization Interface between USP and the Ecdysone Receptor ECR in Insects

Iwema, T., Chaumot, A., Studer, R. A., Robinson-Rechavi, M., Billas, I. M.L., Moras, D., Laudet, V., Bonneton, F.

Journal:

Molecular Biology and Evolution

Year:

2009

Language:

english

File:

PDF, 2.50 MB

english, 2009

36

Encyclopedia of Toxicology || Ecotoxicology, Aquatic Invertebrates

Year:

2014

Language:

english

File:

PDF, 86 KB

english, 2014

37

Unexpected Novel Relational Links Uncovered by Extensive Developmental Profiling of Nuclear Receptor Expression

Bertrand, Stéphanie, Thisse, Bernard, Tavares, Raquel, Sachs, Laurent, Chaumot, Arnaud, Bardet, Pierre-Luc, Escrivà, Héctor, Duffraisse, Maryline, Marchand, Oriane, Safi, Rachid, Thisse, Christine, La

Journal:

Year:

2007

Language:

english

File:

PDF, 1.11 MB

english, 2007

38

Conserved Features and Evolutionary Shifts of the EDA Signaling Pathway Involved in Vertebrate Skin Appendage Development

Pantalacci, S., Chaumot, A., Benoit, G., Sadier, A., Delsuc, F., Douzery, E. J. P., Laudet, V.

Journal:

Molecular Biology and Evolution

Year:

2008

Language:

english

File:

PDF, 1.52 MB

english, 2008

39

Proteogenomic insights into the core-proteome of female reproductive tissues from crustacean amphipods

Trapp, Judith, Almunia, Christine, Gaillard, Jean-Charles, Pible, Olivier, Chaumot, Arnaud, Geffard, Olivier, Armengaud, Jean

Journal:

Journal of Proteomics

Year:

2015

Language:

english

File:

PDF, 1.41 MB

english, 2015

40

Evolution of cadmium tolerance and associated costs in aGammarus fossarumpopulation inhabiting a low-level contaminated stream

Vigneron, A., Geffard, O., Coquery, M., François, A., Quéau, H., Chaumot, A.

Journal:

Year:

2015

Language:

english

File:

PDF, 685 KB

english, 2015

41

USING AGGREGATION METHODS TO ASSESS TOXICANT EFFECTS ON POPULATION DYNAMICS IN SPATIAL SYSTEMS

Chaumot, A., Charles, S., Flammarion, P., Garric, J., Auger, P.

Journal:

Ecological Applications

Year:

2002

Language:

english

File:

PDF, 519 KB

english, 2002

42

Using Aggregation Methods to Assess Toxicant Effects on Population Dynamics in Spatial Systems

A. Chaumot, S. Charles, P. Flammarion, J. Garric and P. Auger

Journal:

Ecological Applications

Year:

2002

Language:

english

File:

PDF, 2.11 MB

english, 2002

43

Data for comparative proteomics of ovaries from five non-model, crustacean amphipods

Trapp, Judith, Almunia, Christine, Gaillard, Jean-Charles, Pible, Olivier, Chaumot, Arnaud, Geffard, Olivier, Armengaud, Jean

Journal:

Year:

2015

Language:

english

File:

PDF, 537 KB

english, 2015

44

Combined effects of drought and the fungicide tebuconazole on aquatic leaf litter decomposition

Pesce, Stéphane, Zoghlami, Olfa, Margoum, Christelle, Artigas, Joan, Chaumot, Arnaud, Foulquier, Arnaud

Journal:

Aquatic Toxicology

Year:

2016

Language:

english

File:

PDF, 1.35 MB

english, 2016

45

Environmental relevance of laboratory-derived kinetic models to predict trace metal bioaccumulation in gammarids: field experimentation at a large spatial scale (France)

Urien, N., Lebrun, J.D., Fechner, L.C., Uher, E., François, A., Quéau, H., Coquery, M., Chaumot, A., Geffard, O.

Journal:

Year:

2016

Language:

english

File:

PDF, 1.68 MB

english, 2016

46

Application of a multidisciplinary and integrative weight-of-evidence approach to a 1-year monitoring survey of the Seine River

Barjhoux, Iris, Fechner, Lise C., Lebrun, Jérémie D., Anzil, Adriana, Ayrault, Sophie, Budzinski, Hélène, Cachot, Jérôme, Charron, Laetitia, Chaumot, Arnaud, Clérandeau, Christelle, Dedourge-Geffard,

Journal:

Environmental Science and Pollution Research

Year:

2016

Language:

english

File:

PDF, 1.22 MB

english, 2016

47

High-throughput proteome dynamics for discovery of key proteins in sentinel species: Unsuspected vitellogenins diversity in the crustacean Gammarus fossarum

Trapp, Judith, Armengaud, Jean, Gaillard, Jean-Charles, Pible, Olivier, Chaumot, Arnaud, Geffard, Olivier

Journal:

Journal of Proteomics

Year:

2016

Language:

english

File:

PDF, 1001 KB

english, 2016

48

Mothers and not genes determine inherited differences in cadmium sensitivities within unexposed populations of the freshwater crustacean Gammarus fossarum

Vigneron, Amandine, Geffard, Olivier, Quéau, Hervé, Chaumot, Arnaud

Journal:

Evolutionary Applications

Year:

2016

Language:

english

File:

PDF, 454 KB

english, 2016

49

Impact of micropollutants on the life-history traits of the mosquito Aedes aegypti: On the relevance of transgenerational studies

Prud'homme, Sophie M., Chaumot, Arnaud, Cassar, Eva, David, Jean-Philippe, Reynaud, Stéphane

Journal:

Environmental Pollution

Year:

2016

Language:

english

File:

PDF, 1.07 MB

english, 2016

50

Ovary and embryo proteogenomic dataset revealing diversity of vitellogenins in the crustacean Gammarus fossarum

Trapp, Judith, Gaillard, Jean-Charles, Chaumot, Arnaud, Geffard, Olivier, Pible, Olivier, Armengaud, Jean

Journal:

Year:

2016

Language:

english

File:

PDF, 626 KB

english, 2016